Lead Data Engineer for Bioinformatics and Data Science

1 month ago


Remote Wrocław Warszawa Kraków, Czech Republic Holisticon Connect Full time
Overview

Holisticon Connect is a leading provider of custom software development services, with a strong presence in the European market. We are committed to delivering high-quality solutions that meet the needs of our clients.

Job Description

We are seeking an experienced Senior Bioinformatics Data Engineer to join our team. In this role, you will be responsible for designing, developing, and maintaining ETL pipelines for extracting, transforming, and loading data for use in cBio and other bioinformatics analysis and visualizations.

You will work closely with bioinformaticians, data scientists, and other stakeholders to understand and meet the data needs and requirements of our organization. Your expertise in bioinformatics visualization systems like cBioPortal, including data loading and troubleshooting, will be essential in ensuring the reliability, scalability, and performance of ETL pipelines and data systems.

In addition to your technical skills, you will also be expected to stay up-to-date with new technologies and best practices in bioinformatics. Your ability to collaborate effectively with cross-functional teams and communicate complex ideas clearly will be critical to the success of this role.

Required Skills and Qualifications
  • 5+ years of experience in bioinformatics and data engineering
  • Strong understanding of ETL processes and data pipeline development
  • Experience with bioinformatics visualization systems like cBioPortal
  • Proficiency in programming languages such as Python and R
  • Familiarity with AWS services such as S3, EC2, CloudWatch, and Lambda
Benefits
  • Competitive salary: $120,000 - $150,000 per year
  • Opportunities for professional growth and development
  • A dynamic and collaborative work environment
  • Flexible working hours and remote work options
  • A comprehensive benefits package, including health insurance, retirement plan, and paid time off
Others

We are an equal opportunities employer and welcome applications from diverse candidates. If you are passionate about bioinformatics and data engineering and want to be part of a dynamic team, please submit your application.



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