Senior Bioinformatics Developer

1 day ago


Remote, Czech Republic AVENGA Full time
Job Title: Senior Bioinformatics Developer

We are seeking an experienced Senior Bioinformatics Developer to join our team at Avenga.

About the Role

The successful candidate will be responsible for designing and developing novel methods and pipelines for harmonizing, integrating, and visualizing large-scale experimental data in human genetics, transcriptomics, knockouts, screening, and other areas. This role requires strong expertise in R/Python programming languages, as well as experience with Nextflow, Docker, Singularity, HPC, and CI/CD tools. Additionally, the ideal candidate will have a solid understanding of biological data analysis and genomics-related research.

Responsibilities
  • Design and develop novel bioinformatics pipelines using R/Python and Nextflow
  • Collaborate with stakeholders to understand requirements and translate them into robust, tested, and performant pipelines
  • Develop and maintain R/Python packages for data integration and visualization
  • Maintain and improve CI/CD workflows for pipeline deployment and testing
  • Participate in code reviews and contribute to team knowledge sharing
Requirements
  • 4+ years of professional experience in R or Python development
  • Experience with communication across teams with different backgrounds (e.g., tech - non-tech, backend - frontend)
  • Strong knowledge of Bash, Linux, and relational databases (PostgreSQL)
  • Excellent understanding of genetic data analysis and genomics-related research
  • Experience with containerization (Docker) and cloud solutions (AWS)
Benefits
  • Competitive salary: €80,000 - €100,000 per year
  • Sport subscription and private healthcare
  • International project opportunities


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